STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD2Tropomodulin 2. (351 aa)    
Predicted Functional Partners:
NEB
Nebulin.
   
 0.869
ADD2
Adducin 2.
    
 
 0.708
ADD3
Adducin 3.
    
 
 0.707
TPM4
Tropomyosin alpha-4 chain; Binds to actin filaments in muscle and non-muscle cells. Plays a central role, in association with the troponin complex, in the calcium dependent regulation of vertebrate striated muscle contraction. Smooth muscle contraction is regulated by interaction with caldesmon. In non-muscle cells is implicated in stabilizing cytoskeleton actin filaments. Binds calcium.
   
 0.694
TPM2
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.694
MYL1
Uncharacterized protein.
   
 
 0.676
CFAP61
Cilia-and flagella-associated protein 61 isoform X2.
    
 
 0.664
RPS6KC1
Ribosomal protein S6 kinase delta-1 isoform X3.
      
 0.663
SUN3
Sad1 and UNC84 domain containing 3.
      
 0.658
THEGL
Theg spermatid protein like.
      
 0.655
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.