Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADAMTS10 | FBN1 | ENSSSCP00000036538 | ENSSSCP00000005017 | Uncharacterized protein. | Fibrillin-1; [Fibrillin-1]: Structural component of the 10-12 nm diameter microfibrils of the extracellular matrix, which conveys both structural and regulatory properties to load-bearing connective tissues. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. In tissues such as the lung, blood vessels and skin, microfibrils form the periphery of the elastic fiber, acting as a scaffold for the deposition of elastin. In addition, microfibrils can occur as elastin-independent networks in tissues such as the ciliary zonule, tendon, cornea and glomerulus [...] | 0.810 |
ADAMTS10 | LOXL1 | ENSSSCP00000036538 | ENSSSCP00000002093 | Uncharacterized protein. | Lysyl oxidase like 1. | 0.423 |
COL1A1 | COL1A2 | ENSSSCP00000066291 | ENSSSCP00000016253 | Collagen type I alpha 1 chain. | Fibrillar collagen NC1 domain-containing protein. | 0.999 |
COL1A1 | COL3A1 | ENSSSCP00000066291 | ENSSSCP00000033771 | Collagen type I alpha 1 chain. | Collagen alpha-1(III) chain preproprotein. | 0.997 |
COL1A1 | COL5A2 | ENSSSCP00000066291 | ENSSSCP00000055229 | Collagen type I alpha 1 chain. | Collagen alpha-2(V) chain preproprotein. | 0.949 |
COL1A1 | DCN | ENSSSCP00000066291 | ENSSSCP00000000977 | Collagen type I alpha 1 chain. | Decorin; May affect the rate of fibrils formation. | 0.860 |
COL1A1 | ELN | ENSSSCP00000066291 | ENSSSCP00000048714 | Collagen type I alpha 1 chain. | Elastin. | 0.641 |
COL1A1 | FBN1 | ENSSSCP00000066291 | ENSSSCP00000005017 | Collagen type I alpha 1 chain. | Fibrillin-1; [Fibrillin-1]: Structural component of the 10-12 nm diameter microfibrils of the extracellular matrix, which conveys both structural and regulatory properties to load-bearing connective tissues. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. In tissues such as the lung, blood vessels and skin, microfibrils form the periphery of the elastic fiber, acting as a scaffold for the deposition of elastin. In addition, microfibrils can occur as elastin-independent networks in tissues such as the ciliary zonule, tendon, cornea and glomerulus [...] | 0.811 |
COL1A1 | LOXL1 | ENSSSCP00000066291 | ENSSSCP00000002093 | Collagen type I alpha 1 chain. | Lysyl oxidase like 1. | 0.501 |
COL1A1 | LUM | ENSSSCP00000066291 | ENSSSCP00000000978 | Collagen type I alpha 1 chain. | Lumican. | 0.883 |
COL1A1 | MMP2 | ENSSSCP00000066291 | ENSSSCP00000073458 | Collagen type I alpha 1 chain. | Uncharacterized protein. | 0.792 |
COL1A2 | COL1A1 | ENSSSCP00000016253 | ENSSSCP00000066291 | Fibrillar collagen NC1 domain-containing protein. | Collagen type I alpha 1 chain. | 0.999 |
COL1A2 | COL3A1 | ENSSSCP00000016253 | ENSSSCP00000033771 | Fibrillar collagen NC1 domain-containing protein. | Collagen alpha-1(III) chain preproprotein. | 0.997 |
COL1A2 | COL5A2 | ENSSSCP00000016253 | ENSSSCP00000055229 | Fibrillar collagen NC1 domain-containing protein. | Collagen alpha-2(V) chain preproprotein. | 0.974 |
COL1A2 | DCN | ENSSSCP00000016253 | ENSSSCP00000000977 | Fibrillar collagen NC1 domain-containing protein. | Decorin; May affect the rate of fibrils formation. | 0.895 |
COL1A2 | ELN | ENSSSCP00000016253 | ENSSSCP00000048714 | Fibrillar collagen NC1 domain-containing protein. | Elastin. | 0.528 |
COL1A2 | FBN1 | ENSSSCP00000016253 | ENSSSCP00000005017 | Fibrillar collagen NC1 domain-containing protein. | Fibrillin-1; [Fibrillin-1]: Structural component of the 10-12 nm diameter microfibrils of the extracellular matrix, which conveys both structural and regulatory properties to load-bearing connective tissues. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. In tissues such as the lung, blood vessels and skin, microfibrils form the periphery of the elastic fiber, acting as a scaffold for the deposition of elastin. In addition, microfibrils can occur as elastin-independent networks in tissues such as the ciliary zonule, tendon, cornea and glomerulus [...] | 0.867 |
COL1A2 | LOXL1 | ENSSSCP00000016253 | ENSSSCP00000002093 | Fibrillar collagen NC1 domain-containing protein. | Lysyl oxidase like 1. | 0.506 |
COL1A2 | LUM | ENSSSCP00000016253 | ENSSSCP00000000978 | Fibrillar collagen NC1 domain-containing protein. | Lumican. | 0.988 |
COL1A2 | MMP2 | ENSSSCP00000016253 | ENSSSCP00000073458 | Fibrillar collagen NC1 domain-containing protein. | Uncharacterized protein. | 0.983 |
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