STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB8Serpin family B member 8; Belongs to the serpin family. (374 aa)    
Predicted Functional Partners:
SDR9C7
Short chain dehydrogenase/reductase family 9C member 7; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.739
SLC66A3
PQ-loop repeat-containing protein 3.
      
 0.703
RMDN2
Regulator of microtubule dynamics 2.
      
 0.703
ZCCHC2
Zinc finger CCHC domain-containing protein 2.
      
 0.649
SERPINB10
SERPIN domain-containing protein; Belongs to the serpin family.
     
  0.590
C1QTNF2
C1q and TNF related 2.
   
 0.575
RHBDD3
Rhomboid domain-containing protein 3.
      
 0.570
PLAUR
Plasminogen activator, urokinase receptor.
   
 0.569
CAMKK2
Calcium/calmodulin-dependent protein kinase kinase 2 isoform 1.
   
  
 0.561
TBC1D10A
TBC1 domain family member 10A isoform 2.
      
 0.559
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.