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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO33F-box only protein 33. (558 aa)    
Predicted Functional Partners:
WDR47
WD repeat domain 47.
      
 0.742
CNOT6
CCR4-NOT transcription complex subunit 6.
   
  
 0.663
CUL1
Cullin 1; Belongs to the cullin family.
   
 
 0.639
ARHGEF12
Rho guanine nucleotide exchange factor 12.
      
 0.580
MAFF
MAF bZIP transcription factor F.
      
 0.574
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.573
NPAS4
Neuronal PAS domain protein 4.
      
 0.570
SAMD4B
Sterile alpha motif domain containing 4B.
   
  
 0.546
PNN
Uncharacterized protein.
   
  
 0.537
LRFN5
Leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1.
      
 0.517
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.