STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUSC1Tumor suppressor candidate 1. (211 aa)    
Predicted Functional Partners:
RFX8
RFX family member 8, lacking RFX DNA binding domain.
      
 0.900
KRT85
Keratin 85; Belongs to the intermediate filament family.
      
 0.765
ADAMTSL1
ADAMTS like 1.
      
 0.690
BNC2
Basonuclin 2.
      
 0.681
TFE3
Transcription factor binding to IGHM enhancer 3.
      
 0.547
SLCO2A1
Solute carrier organic anion transporter family member.
      
 0.515
ERP29
Endoplasmic reticulum resident protein 29; Does not seem to be a disulfide isomerase.
      
 0.514
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.512
ZNF197
Zinc finger protein 197.
      
 0.505
RSU1
Ras suppressor protein 1.
      
 0.495
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.