STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP78Centrosomal protein 78. (790 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK.
     
 0.836
TMEM82
Transmembrane protein 82.
      
 0.768
PSAT1
Phosphoserine aminotransferase.
 
    
 0.706
YPEL1
Protein yippee-like; Belongs to the yippee family.
   
  
 0.701
SPATA3
Uncharacterized protein.
   
  
 0.692
DEUP1
Deuterosome assembly protein 1.
      
 0.690
CEP41
Centrosomal protein of 41 kDa isoform 1.
      
 0.685
UBXN11
UBX domain protein 11.
   
  
 0.674
C8orf37
Chromosome 8 open reading frame 37.
      
 0.674
CCNO
Cyclin-O; Belongs to the cyclin family.
      
 0.668
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.