STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP77Cilia and flagella associated protein 77. (282 aa)    
Predicted Functional Partners:
SPACA9
Sperm acrosome-associated protein 9 isoform a.
   
 
 0.629
CCDC173
Coiled-coil domain-containing protein 173.
    
 
 0.594
C5orf49
Chromosome 5 open reading frame 49.
   
   0.572
EFHB
EF-hand domain family member B.
   
   0.567
C9orf116
Chromosome 9 open reading frame 116.
   
   0.566
EFHC2
EF-hand domain-containing family member C2.
   
   0.564
EFHC1
EF-hand domain containing 1.
   
   0.564
C1orf158
Chromosome 1 open reading frame 158.
   
   0.557
C11orf1
Chromosome 11 open reading frame 1.
   
   0.556
ENKUR
Enkurin, TRPC channel interacting protein.
   
   0.555
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.