STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPD5Endo/exonuclease/phosphatase domain-containing protein. (486 aa)    
Predicted Functional Partners:
SOGA3
Uncharacterized protein.
      
 0.514
ARHGAP39
Rho GTPase activating protein 39.
      
 0.514
GRINA
Glutamate ionotropic receptor NMDA type subunit associated protein 1.
      
 0.508
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
      
 0.487
ADGRF1
Adhesion G-protein coupled receptor F1 isoform 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.487
CYHR1
Cysteine and histidine rich 1.
      
 0.487
PPP1R16B
Protein phosphatase 1 regulatory inhibitor subunit 16B isoform X1.
      
 0.477
TSPAN11
Tetraspanin.
      
 0.469
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.465
DNMBP
Dynamin binding protein.
      
 0.465
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.