Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CD5LUncharacterized protein. (574 aa)    
Predicted Functional Partners:
JCHAIN
Joining chain of multimeric IgA and IgM.
   
 
 0.780
VSIG4
V-set and immunoglobulin domain containing 4.
   
  
 0.767
S100A9
EF-hand domain-containing protein; Belongs to the S-100 family.
    
 0.748
CLEC4F
C-type lectin domain family 4 member F.
   
 
 0.737
PRDX1
Peroxiredoxin-1.
    
  0.715
KIRREL1
Kirre like nephrin family adhesion molecule 1.
   
  
 0.573
LAC_PIG
Ig lambda chain C region.
      
 0.552
TIMD4
T cell immunoglobulin and mucin domain containing 4.
   
  
 0.533
ALCAM
Activated leukocyte cell adhesion molecule.
    
 0.520
TP23
Proline-rich peptide SP-B-like; The parotid hormone stimulates dentinal fluid transport in teeth.
      
 0.485
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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