STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYPL2Synaptophysin like 2. (278 aa)    
Predicted Functional Partners:
PSMA5
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
      
 0.589
SERPINB10
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.571
MOB3C
MOB kinase activator 3C.
      
 0.568
SCAMP1
Secretory carrier-associated membrane protein 1; Functions in post-Golgi recycling pathways. Acts as a recycling carrier to the cell surface.
   
 
 0.564
RABAC1
Prenylated Rab acceptor protein 1; General Rab protein regulator required for vesicle formation from the Golgi complex. May control vesicle docking and fusion by mediating the action of Rab GTPases to the SNARE complexes. In addition it inhibits the removal of Rab GTPases from the membrane by GDI1.
    
 
 0.543
NOA1
Nitric oxide associated 1.
      
 0.536
MTMR1
Myotubularin related protein 1.
      
 0.526
SPAG9
Sperm associated antigen 9.
    
 
 0.517
PSMB1
Proteasome subunit beta.
      
 0.517
PSMB3
Proteasome subunit beta.
      
 0.516
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.