STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20orf194Chromosome 20 open reading frame 194. (1190 aa)    
Predicted Functional Partners:
DNAL4
Dynein light chain 4, axonemal; Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity (By similarity).
    
 
 0.674
DYNLT1
Uncharacterized protein.
    
 
 0.660
DNHD1
Uncharacterized protein.
    
 
 0.649
DYNLT3
Dynein light chain Tctex-type 3.
    
 
 0.604
FAM168A
Family with sequence similarity 168 member A.
   
  
 0.593
TTBK1
Tau tubulin kinase 1.
      
 0.573
NRIP2
Nuclear receptor interacting protein 2.
      
 0.571
VPS26A
VPS26, retromer complex component A.
      
 0.570
DAW1
WD_REPEATS_REGION domain-containing protein.
      
 0.557
DYNLL2
Dynein light chain.
    
 
 0.556
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.