STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1S7I1_PIGBeta-defensin; Has antibacterial activity; Belongs to the beta-defensin family. (67 aa)    
Predicted Functional Partners:
DEFB108B
Defensin beta 108B.
      
 0.548
DEFB113
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.517
DEFB129
Prepro-beta-defensin 129 protein.
      
 0.513
DEFB1
Beta-defensin 1.
      
 0.513
DEFB110
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.503
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.499
DEFB127
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.499
LCN9
Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.
      
 0.497
DEFB115
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.489
LOC100157086
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.489
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.