STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCNT7Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7; Glycosyltransferase. (429 aa)    
Predicted Functional Partners:
LYRM4
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.841
C6orf15
Chromosome 6 open reading frame 15.
      
 0.837
TFAP2D
Transcription factor AP-2 delta.
      
 0.830
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.760
CFAP58
Cilia-and flagella-associated protein 58.
      
 0.730
ESRP1
Epithelial splicing regulatory protein 1.
      
 0.667
MUC20
Uncharacterized protein.
     
 0.637
PAK5
Non-specific serine/threonine protein kinase.
      
 0.611
HOXD13
Homeobox protein Hox-D13.
   
 
 0.549
SPMI
Seminal plasma sperm motility inhibitor; Inhibitor of sperm motility.
      
 0.546
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.