STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAE1mRNA export factor; Plays a role in mitotic bipolar spindle formation. Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton. (368 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
 0.997
NXF1
Nuclear RNA export factor 1.
    
 0.991
NUP214
Nucleoporin 214.
    
 0.989
LOC100153087
Uncharacterized protein.
    
 0.979
NUP88
Nucleoporin 88.
   
 0.945
NUP153
Nucleoporin 153.
    
 0.943
GLE1
GLE1 RNA export mediator.
   
 0.929
NUP42
Nucleoporin-like protein 2.
    
 0.929
TPR
Translocated promoter region, nuclear basket protein.
   
 0.912
RANBP2
RAN binding protein 2.
   
 0.907
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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