STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRELID3BPRELI domain containing protein 3B; Belongs to the slowmo family. (194 aa)    
Predicted Functional Partners:
ZNF831
Zinc finger protein 831.
      
 0.904
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.688
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.688
SUPT7L
STAGA complex 65 subunit gamma isoform b.
      
 0.688
PCGF6
Polycomb group RING finger protein 6 isoform a.
      
 0.688
TRIAP1
Uncharacterized protein.
    
 
 0.675
SPAG5
Uncharacterized protein.
   
  
 0.614
LRIG2
Leucine rich repeats and immunoglobulin like domains 2.
      
 0.611
IL22RA2
Interleukin 22 receptor subunit alpha 2.
      
 0.610
CMTR1
Cap methyltransferase 1.
      
 0.609
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.