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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOAOtoancorin. (1133 aa)    
Predicted Functional Partners:
BTBD11
Ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform a.
      
 0.829
CSMD3
CUB and Sushi multiple domains 3.
      
 0.779
SLC4A10
Anion exchange protein.
      
 0.776
ZNF536
Zinc finger protein 536.
      
 0.609
METTL9
Methyltransferase like 9.
 
    
 0.601
THRB
Thyroid hormone receptor beta isoform X2.
      
 0.542
CTSO
Cathepsin O preproprotein; Belongs to the peptidase C1 family.
      
 0.541
HSD17B12
Hydroxysteroid 17-beta dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.535
FRYL
FRY like transcription coactivator.
      
 0.532
TECTA
Tectorin alpha.
      
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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