STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD8JmjC domain-containing protein 8 isoform 1. (269 aa)    
Predicted Functional Partners:
WDR24
GATOR complex protein WDR24.
 
 
  
 0.663
SNF8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
 
      0.656
IFFO1
Intermediate filament family orphan 1; Belongs to the intermediate filament family.
      
 0.571
OSGIN1
Oxidative stress induced growth inhibitor 1.
      
 0.552
JMJD4
JmjC domain-containing protein 4 isoform X1.
   
  
 0.537
CEND1
Cell cycle exit and neuronal differentiation protein 1; Involved in neuronal differentiation.
      
 0.515
PEF1
Penta-EF-hand domain containing 1.
      
 0.513
IFFO2
Intermediate filament family orphan 2; Belongs to the intermediate filament family.
      
 0.505
TET3
Tet methylcytosine dioxygenase 3.
      
 0.483
EVX2
Even-skipped homeobox 2.
      
 0.483
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.