STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JPT2Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
GPR82
G protein-coupled receptor 82.
      
 0.777
ASPDH
Josephin domain-containing protein.
      
 0.761
JPT1
Jupiter microtubule associated homolog 1.
      
 0.712
YARS1
Tyrosine--tRNA ligase.
  
  
 0.590
CRAMP1
Cramped chromatin regulator homolog 1.
      
 0.581
MTREX
Exosome RNA helicase MTR4.
      
 0.577
DNASE2
Deoxyribonuclease-2-alpha; Hydrolyzes DNA under acidic conditions with a preference for double-stranded DNA. Plays a major role in the degradation of nuclear DNA in cellular apoptosis during development. Necessary for proper fetal development and for definitive erythropoiesis in fetal liver, where it degrades nuclear DNA expelled from erythroid precursor cells (By similarity); Belongs to the DNase II family.
      
 0.525
USP11
Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family.
      
 0.524
NR6A1
Nuclear receptor subfamily 6 group A member 1; Orphan nuclear receptor. Binds to a response element containing the sequence 5'-TCAAGGTCA-3'. May be involved in the regulation of gene expression in germ cell development during gametogenesis (By similarity); Belongs to the nuclear hormone receptor family. NR6 subfamily.
      
 0.514
RNPEPL1
Arginyl aminopeptidase like 1.
      
 0.513
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.