Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JPT2Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
GPR82
G protein-coupled receptor 82.
      
 0.766
ASPDH
Josephin domain-containing protein.
      
 0.763
ZNHIT1
Zinc finger HIT-type containing 1.
   
  
 0.562
CRAMP1
Cramped chromatin regulator homolog 1.
      
 0.558
MTREX
Exosome RNA helicase MTR4.
    
 
 0.548
YARS1
Tyrosine--tRNA ligase.
  
 
 0.542
ARSG
Arylsulfatase G.
      
 0.536
ZNF235
Zinc finger protein 112.
      
 0.531
JPT1
Jupiter microtubule associated homolog 1.
   
  
 0.518
RAC3
Rac family small GTPase 3.
   
 
 0.517
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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