STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF103E3 ubiquitin-protein ligase RNF103 isoform 1. (685 aa)    
Predicted Functional Partners:
CHMP3
Uncharacterized protein.
 
    
 0.766
RBM42
RNA binding motif protein 42.
      
 0.729
TSPAN31
Tetraspanin-31.
      
 0.729
ABCC10
ATP binding cassette subfamily C member 10.
      
 0.723
RAB4B
Uncharacterized protein.
      
 0.722
NOL4
Nucleolar protein 4.
      
 0.694
PTPRM
Protein tyrosine phosphatase receptor type M.
   
 
 0.677
FKBP10
Peptidylprolyl isomerase.
   
 
 0.623
DHX38
DEAH-box helicase 38.
   
 
 0.614
NUP88
Nucleoporin 88.
      
 0.613
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.