STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH8Atonal bHLH transcription factor 8. (315 aa)    
Predicted Functional Partners:
OLFML1
Olfactomedin-like domain-containing protein.
      
 0.765
BCL6B
BCL6B transcription repressor.
    
 
 0.682
MMP23B
Matrix metallopeptidase 23B.
      
 0.631
RNF181
RING-type domain-containing protein.
      
 0.573
ADCY4
Adenylate cyclase type 4; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.521
MRGPRF
Mas-related G-protein coupled receptor member F isoform X1; Belongs to the G-protein coupled receptor 1 family.
      
 0.518
PRRX2
Paired related homeobox 2.
      
 0.517
FKBP10
Peptidylprolyl isomerase.
      
 0.517
EFEMP2
EGF containing fibulin extracellular matrix protein 2.
      
 0.516
ZSCAN2
Zinc finger and SCAN domain containing 2.
    
 
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.