STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH11G-patch domain containing 11. (280 aa)    
Predicted Functional Partners:
CCDC130
Coiled-coil domain containing 130.
    
 
 0.865
NRDC
Nardilysin convertase.
    
 
 0.845
FN3KRP
Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family.
      
 0.800
RBM17
RNA binding motif protein 17.
    
 
 0.732
CEP128
Centrosomal protein 128.
      
 0.698
RAB3B
RAB3B, member RAS oncogene family.
   
  
 0.685
HARS2
Histidyl-tRNA synthetase 2, mitochondrial.
      
 0.677
SF3B4
Splicing factor 3b subunit 4.
   
 
 0.628
SF3A3
Splicing factor 3a subunit 3.
   
 
 0.621
HARS1
Histidyl-tRNA synthetase.
      
 0.617
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.