STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGARPAIF-MLS domain-containing protein. (238 aa)    
Predicted Functional Partners:
NFU1
NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2.
   
  
 0.733
THOC7
THO complex subunit 7 homolog isoform X1.
   
  
 0.661
NSD1
Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform X1.
   
 
 0.629
EIF2B5
Eukaryotic translation initiation factor 2B subunit epsilon.
      
 0.578
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 
 0.575
ST6GAL2
Beta-galactoside alpha-2,6-sialyltransferase 2 isoform a; Belongs to the glycosyltransferase 29 family.
      
 0.574
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 
 0.560
I3L6E6_PIG
TPR_REGION domain-containing protein.
   
 
 0.524
KDM6A
Lysine demethylase 6A.
   
 
 0.524
KDM6B
Lysine demethylase 6B.
   
 
 0.524
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.