STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCL1SPARC like 1. (675 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
  
 0.799
DCUN1D2
DCN1-like protein.
      
 0.685
AMBN
Ameloblastin; Involved in the mineralization and structural organization of enamel; Belongs to the ameloblastin family.
   
  
 0.647
ENAM
142 kDa enamelin; Involved in the mineralization and structural organization of enamel. Involved in the extension of enamel during the secretory stage of dental enamel formation.
  
   
 0.630
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.627
PLEKHA2
Pleckstrin homology domain containing A2.
      
 0.611
PCDH18
Protocadherin 18.
   
  
 0.546
CBLN2
Cerebellin 2 precursor.
   
 
 0.539
TECTA
Tectorin alpha.
   
  
 0.529
JAM2
Junctional adhesion molecule 2.
   
  
 0.523
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.