Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC70Coiled-coil domain containing 70. (219 aa)    
Predicted Functional Partners:
ZSWIM7
Zinc finger SWIM domain-containing protein 7.
      
 0.895
TEKT3
Tektin-3 isoform X1.
   
  
 0.773
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
  
 0.766
PTBP2
Polypyrimidine tract binding protein 2.
      
 0.765
CATSPER1
Ion_trans domain-containing protein.
      
 0.762
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 
 0.705
STX5
Syntaxin 5.
   
 
 0.691
ALG11
ALG11 alpha-1,2-mannosyltransferase.
   
  
 0.628
STRA8
Stimulated by retinoic acid 8.
      
 0.594
USO1
USO1 vesicle transport factor.
   
 
 0.585
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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