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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF11PHD finger protein 11. (307 aa)    
Predicted Functional Partners:
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
 
 
  
 0.958
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.869
KCTD5
Potassium channel tetramerization domain containing 5.
    
 
 0.869
RCBTB1
RCC1 and BTB domain containing protein 1.
    
 
 0.739
NUBPL
Nucleotide binding protein like.
      
 0.734
PTP4A1
Protein tyrosine phosphatase type IVA 1 isoform X1.
   
  
 0.726
CARHSP1
Calcium regulated heat stable protein 1.
   
  
 0.674
OR6N2
Olfactory receptor.
      
 0.623
PHF1
PHD finger protein 1 isoform X1.
   
 
 0.565
LITAF
Lipopolysaccharide-induced tumor necrosis factor-alpha factor isoform X1.
   
 
 0.557
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.