Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF11PHD finger protein 11. (307 aa)    
Predicted Functional Partners:
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
 
   
 0.970
KCTD5
Potassium channel tetramerization domain containing 5.
    
 
 0.894
NUBPL
Nucleotide binding protein like.
      
 0.770
CARMIL1
Capping protein regulator and myosin 1 linker 1.
      
 0.765
PTP4A1
Protein tyrosine phosphatase type IVA 1 isoform X1.
      
 0.761
RCBTB1
RCC1 and BTB domain containing protein 1.
      
 0.731
RCBTB2
RCC1 and BTB domain containing protein 2.
      
 0.722
ANKHD1
ANK_REP_REGION domain-containing protein.
    
 0.684
MMD
Monocyte to macrophage differentiation associated.
      
 0.650
OR6N2
Olfactory receptor.
      
 0.642
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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