Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RUBCNLRubicon like autophagy enhancer. (664 aa)    
Predicted Functional Partners:
PGM2
Phosphoglucomutase 2.
   
    0.761
LIX1
Limb and CNS expressed 1.
   
    0.761
CWC25
Pre-mRNA-splicing factor CWC25 homolog.
   
    0.761
SLCO1A2
Solute carrier organic anion transporter family member.
   
    0.761
ACOT11
Acyl-CoA thioesterase 11.
   
    0.761
C1orf109
Chromosome 1 open reading frame 109.
   
    0.761
LOC100518318
Uncharacterized protein.
   
    0.761
UVRAG
UV radiation resistance associated.
    
 0.754
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
    0.742
LOC100517129
Uncharacterized protein.
   
   0.725
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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