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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCP1Lymphocyte cytosolic protein 1. (642 aa)    
Predicted Functional Partners:
KLHL6
BTB domain-containing protein.
   
 
 0.712
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization (By similarity).
    
 
 0.665
HCLS1
Hematopoietic cell-specific Lyn substrate 1.
   
 
 0.628
LAPTM5
Lysosomal protein transmembrane 5.
   
    0.603
S100A8
Protein S100; Belongs to the S-100 family.
    
 
 0.601
ARPC4
Actin related protein 2/3 complex subunit 4.
   
  
 0.601
ISYNA1
Inositol-3-phosphate synthase 1.
    
 
 0.574
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
   
  
 0.566
CAP1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 
 0.542
NCF1
Uncharacterized protein.
   
  
 0.526
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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