STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH8Protocadherin 8. (1071 aa)    
Predicted Functional Partners:
WDR27
Uncharacterized protein.
      
 0.778
MROH7
Uncharacterized protein.
      
 0.773
CDCP2
CUB domain containing protein 2.
      
 0.730
PCDH1
Protocadherin 1.
      
0.564
I3LLG5_PIG
Uncharacterized protein.
    
 
 0.532
TNRC6C
Trinucleotide repeat containing adaptor 6C.
   
 
 0.526
INSYN2A
Inhibitory synaptic factor 2A.
      
 0.514
RASL10A
Ras-like protein family member 10A.
    
 
 0.474
PCDH9
Protocadherin 9.
      
0.467
HAGHL
Hydroxyacylglutathione hydrolase like.
      
 0.400
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.