Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM160B2Family with sequence similarity 160 member B2. (737 aa)    
Predicted Functional Partners:
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.642
ADAM28
ADAM metallopeptidase domain 28.
      
 0.617
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
      
 0.564
HMBOX1
Homeobox-containing protein 1 isoform 1.
      
 0.546
TMEM132A
Transmembrane protein 132A.
      
 0.540
FAM167B
Family with sequence similarity 167 member B.
      
 0.531
STMN4
Stathmin 4.
      
 0.502
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
      
 0.502
PALD1
Phosphatase domain containing paladin 1.
      
 0.492
AKTIP
AKT-interacting protein isoform 1.
    
 
 0.487
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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