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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM160B2Family with sequence similarity 160 member B2. (737 aa)    
Predicted Functional Partners:
ADAM28
ADAM metallopeptidase domain 28.
      
 0.665
HMBOX1
Homeobox-containing protein 1 isoform 1.
   
  
 0.651
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
      
 0.647
STMN4
Stathmin 4.
      
 0.589
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
   
  
 0.578
TMEM132A
Transmembrane protein 132A.
      
 0.573
MON1B
MON1 homolog B, secretory trafficking associated.
      
 0.514
RBM17
RNA binding motif protein 17.
      
 0.507
AAGAB
Alpha-and gamma-adaptin-binding protein p34 isoform 1.
      
 0.507
MON1A
Uncharacterized protein.
      
 0.499
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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