Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPPhytanoyl-CoA 2-hydroxylase interacting protein. (330 aa)    
Predicted Functional Partners:
PHYH
Phytanoyl-CoA 2-hydroxylase.
    
 
 0.650
PDE9A
Phosphodiesterase.
    
 
 0.588
LIMD1
LIM domain-containing protein 1.
    
   0.564
WTIP
WT1 interacting protein.
    
   0.564
KIF15
Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
   0.564
ILRUN
N_BRCA1_IG domain-containing protein.
      
 0.490
PAQR5
Progestin and adipoQ receptor family member 5.
    
 
 0.472
PAQR6
Uncharacterized protein.
    
 
 0.472
ADGRL1
Adhesion G protein-coupled receptor L1; Belongs to the G-protein coupled receptor 2 family.
      
 0.456
MICAL3
Microtubule associated monooxygenase, calponin and LIM domain containing 3.
      
 0.451
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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