STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORBS3Sorbin and SH3 domain containing 3. (632 aa)    
Predicted Functional Partners:
VCL
Vinculin; Actin filament (F-actin)-binding protein involved in cell- matrix adhesion and cell-cell adhesion. Regulates cell-surface E- cadherin expression and potentiates mechanosensing by the E-cadherin complex. May also play important roles in cell morphology and locomotion; Belongs to the vinculin/alpha-catenin family.
   
 0.939
LGI3
Leucine rich repeat LGI family member 3.
      
 0.917
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
  
 0.902
PXN
Uncharacterized protein.
    
 0.865
TLN1
Talin 1.
   
 
 0.863
PRDM10
PR/SET domain 10.
      
 0.849
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 
 0.827
SORBS1
Sorbin and SH3 domain containing 1.
    
0.819
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 
 0.811
GCH1
GTP cyclohydrolase 1 isoform 1.
    
   0.689
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.