STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFSWAPSplicing factor, suppressor of white-apricot homolog isoform 2. (944 aa)    
Predicted Functional Partners:
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
  
 0.696
GTF2F1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
  
 0.640
MIS12
MIS12 kinetochore complex component.
      
 0.630
PPAN
Suppressor of SWI4 1 homolog isoform 1.
      
 0.601
CDC5L
Cell division cycle 5-like protein.
      
 0.599
CRAMP1
Cramped chromatin regulator homolog 1.
   
  
 0.588
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.572
CLK2
CDC like kinase 2.
   
  
 0.568
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3 isoform a.
      
 0.559
ZCCHC8
Zinc finger CCHC-type containing 8.
 
 
  
 0.550
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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