STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIWIL1Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family. (861 aa)    
Predicted Functional Partners:
TDRD6
Tudor domain containing 6.
   
 
 0.857
TDRD1
Tudor domain containing 1.
   
 
 0.856
TDRD9
Tudor domain containing 9.
   
 
 0.771
NME8
NME/NM23 family member 8.
   
 
 0.697
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
   
 
 0.686
CBY2
Spermatid associated.
   
  
 0.684
SOX30
SRY-box transcription factor 30.
      
 0.672
TDRD5
Tudor domain containing 5.
   
 
 0.668
RNF17
Ring finger protein 17.
   
 
 0.660
GGNBP2
Gametogenetin binding protein 2.
      
 0.655
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.