STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC8Zinc finger CCHC-type containing 8. (767 aa)    
Predicted Functional Partners:
RBM7
RNA-binding protein 7 isoform b.
    
 
 0.994
MTREX
Exosome RNA helicase MTR4.
   
 0.935
ZCCHC7
Zinc finger CCHC-type containing 7.
     
 0.857
EXOSC3
Exosome complex component RRP40 isoform 1.
   
 
 0.806
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.803
EXOSC8
Exosome component 8.
    
 
 0.728
EXOSC1
Exosome component 1.
    
 
 0.646
EXOSC7
Uncharacterized protein.
   
 
 0.634
WDR33
Pre-mRNA 3' end processing protein WDR33 isoform X1.
   
  
 0.621
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
   
  
 0.617
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.