SRRM4 protein (Sus scrofa) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SRRM4

Serine/arginine repetitive matrix 4. (611 aa)

Predicted Functional Partners:

MEX3B

0.735

NOVA1

0.677

CELF3

0.672

CMTR1

0.597

SRRM2

0.586

CELF4

0.582

SFSWAP

0.572

PTBP1

0.554

NRSN1

0.549

ACTL6A

0.540

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	SRRM4	ENSSSCP00000012532	ENSSSCP00000010509	Actin-like protein 6A isoform X1; Belongs to the actin family.	Serine/arginine repetitive matrix 4.	0.540
CELF3	MEX3B	ENSSSCP00000056250	ENSSSCP00000052119	CUGBP Elav-like family member 3.	Mex-3 RNA binding family member B.	0.666
CELF3	NOVA1	ENSSSCP00000056250	ENSSSCP00000040587	CUGBP Elav-like family member 3.	NOVA alternative splicing regulator 1.	0.644
CELF3	PTBP1	ENSSSCP00000056250	ENSSSCP00000062213	CUGBP Elav-like family member 3.	Polypyrimidine tract-binding protein 1; Plays a role in pre-mRNA splicing and in the regulation of alternative splicing events. Activates exon skipping of its own pre- mRNA during muscle cell differentiation. Binds to the polypyrimidine tract of introns. May promote RNA looping when bound to two separate polypyrimidine tracts in the same pre-mRNA. May promote the binding of U2 snRNP to pre-mRNA. Cooperates with RAVER1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre- mRNA. Represses the splicing of MAPT/Tau exon 10 (By similarity).	0.499
CELF3	SRRM4	ENSSSCP00000056250	ENSSSCP00000010509	CUGBP Elav-like family member 3.	Serine/arginine repetitive matrix 4.	0.672
CELF4	MEX3B	ENSSSCP00000048996	ENSSSCP00000052119	CUGBP Elav-like family member 4.	Mex-3 RNA binding family member B.	0.573
CELF4	NOVA1	ENSSSCP00000048996	ENSSSCP00000040587	CUGBP Elav-like family member 4.	NOVA alternative splicing regulator 1.	0.497
CELF4	PTBP1	ENSSSCP00000048996	ENSSSCP00000062213	CUGBP Elav-like family member 4.	Polypyrimidine tract-binding protein 1; Plays a role in pre-mRNA splicing and in the regulation of alternative splicing events. Activates exon skipping of its own pre- mRNA during muscle cell differentiation. Binds to the polypyrimidine tract of introns. May promote RNA looping when bound to two separate polypyrimidine tracts in the same pre-mRNA. May promote the binding of U2 snRNP to pre-mRNA. Cooperates with RAVER1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre- mRNA. Represses the splicing of MAPT/Tau exon 10 (By similarity).	0.475
CELF4	SRRM4	ENSSSCP00000048996	ENSSSCP00000010509	CUGBP Elav-like family member 4.	Serine/arginine repetitive matrix 4.	0.582
CMTR1	PTBP1	ENSSSCP00000001713	ENSSSCP00000062213	Cap methyltransferase 1.	Polypyrimidine tract-binding protein 1; Plays a role in pre-mRNA splicing and in the regulation of alternative splicing events. Activates exon skipping of its own pre- mRNA during muscle cell differentiation. Binds to the polypyrimidine tract of introns. May promote RNA looping when bound to two separate polypyrimidine tracts in the same pre-mRNA. May promote the binding of U2 snRNP to pre-mRNA. Cooperates with RAVER1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre- mRNA. Represses the splicing of MAPT/Tau exon 10 (By similarity).	0.495
CMTR1	SRRM2	ENSSSCP00000001713	ENSSSCP00000055312	Cap methyltransferase 1.	Serine/arginine repetitive matrix 2.	0.515
CMTR1	SRRM4	ENSSSCP00000001713	ENSSSCP00000010509	Cap methyltransferase 1.	Serine/arginine repetitive matrix 4.	0.597
MEX3B	CELF3	ENSSSCP00000052119	ENSSSCP00000056250	Mex-3 RNA binding family member B.	CUGBP Elav-like family member 3.	0.666
MEX3B	CELF4	ENSSSCP00000052119	ENSSSCP00000048996	Mex-3 RNA binding family member B.	CUGBP Elav-like family member 4.	0.573
MEX3B	NOVA1	ENSSSCP00000052119	ENSSSCP00000040587	Mex-3 RNA binding family member B.	NOVA alternative splicing regulator 1.	0.527
MEX3B	PTBP1	ENSSSCP00000052119	ENSSSCP00000062213	Mex-3 RNA binding family member B.	Polypyrimidine tract-binding protein 1; Plays a role in pre-mRNA splicing and in the regulation of alternative splicing events. Activates exon skipping of its own pre- mRNA during muscle cell differentiation. Binds to the polypyrimidine tract of introns. May promote RNA looping when bound to two separate polypyrimidine tracts in the same pre-mRNA. May promote the binding of U2 snRNP to pre-mRNA. Cooperates with RAVER1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre- mRNA. Represses the splicing of MAPT/Tau exon 10 (By similarity).	0.521
MEX3B	SRRM4	ENSSSCP00000052119	ENSSSCP00000010509	Mex-3 RNA binding family member B.	Serine/arginine repetitive matrix 4.	0.735
NOVA1	CELF3	ENSSSCP00000040587	ENSSSCP00000056250	NOVA alternative splicing regulator 1.	CUGBP Elav-like family member 3.	0.644
NOVA1	CELF4	ENSSSCP00000040587	ENSSSCP00000048996	NOVA alternative splicing regulator 1.	CUGBP Elav-like family member 4.	0.497
NOVA1	MEX3B	ENSSSCP00000040587	ENSSSCP00000052119	NOVA alternative splicing regulator 1.	Mex-3 RNA binding family member B.	0.527