STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEBP1Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
MRPL40
Uncharacterized protein.
   
 
 0.727
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.712
FRRS1L
Ferric chelate reductase 1 like.
   
 
 0.712
DAP3
Death associated protein 3.
   
 
 0.710
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.701
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.700
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.697
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.696
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.690
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.688
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.