Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AATF | BMS1 | ENSSSCP00000018747 | ENSSSCP00000025609 | Apoptosis antagonizing transcription factor. | BMS1 ribosome biogenesis factor. | 0.989 |
AATF | DDX10 | ENSSSCP00000018747 | ENSSSCP00000015935 | Apoptosis antagonizing transcription factor. | RNA helicase. | 0.936 |
AATF | DDX56 | ENSSSCP00000018747 | ENSSSCP00000070753 | Apoptosis antagonizing transcription factor. | Uncharacterized protein. | 0.912 |
AATF | IMP4 | ENSSSCP00000018747 | ENSSSCP00000016674 | Apoptosis antagonizing transcription factor. | U3 small nucleolar ribonucleoprotein IMP4 isoform a. | 0.985 |
AATF | PDCD11 | ENSSSCP00000018747 | ENSSSCP00000011292 | Apoptosis antagonizing transcription factor. | Programmed cell death 11. | 0.981 |
AATF | PES1 | ENSSSCP00000018747 | ENSSSCP00000010681 | Apoptosis antagonizing transcription factor. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.797 |
AATF | PWP2 | ENSSSCP00000018747 | ENSSSCP00000064459 | Apoptosis antagonizing transcription factor. | Uncharacterized protein. | 0.979 |
AATF | RBM19 | ENSSSCP00000018747 | ENSSSCP00000010533 | Apoptosis antagonizing transcription factor. | RNA binding motif protein 19. | 0.927 |
AATF | SURF6 | ENSSSCP00000018747 | ENSSSCP00000050881 | Apoptosis antagonizing transcription factor. | Surfeit 6. | 0.556 |
AATF | WDR12 | ENSSSCP00000018747 | ENSSSCP00000017075 | Apoptosis antagonizing transcription factor. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.787 |
BMS1 | AATF | ENSSSCP00000025609 | ENSSSCP00000018747 | BMS1 ribosome biogenesis factor. | Apoptosis antagonizing transcription factor. | 0.989 |
BMS1 | DDX10 | ENSSSCP00000025609 | ENSSSCP00000015935 | BMS1 ribosome biogenesis factor. | RNA helicase. | 0.910 |
BMS1 | DDX56 | ENSSSCP00000025609 | ENSSSCP00000070753 | BMS1 ribosome biogenesis factor. | Uncharacterized protein. | 0.808 |
BMS1 | IMP4 | ENSSSCP00000025609 | ENSSSCP00000016674 | BMS1 ribosome biogenesis factor. | U3 small nucleolar ribonucleoprotein IMP4 isoform a. | 0.993 |
BMS1 | PDCD11 | ENSSSCP00000025609 | ENSSSCP00000011292 | BMS1 ribosome biogenesis factor. | Programmed cell death 11. | 0.997 |
BMS1 | PES1 | ENSSSCP00000025609 | ENSSSCP00000010681 | BMS1 ribosome biogenesis factor. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. | 0.928 |
BMS1 | PWP2 | ENSSSCP00000025609 | ENSSSCP00000064459 | BMS1 ribosome biogenesis factor. | Uncharacterized protein. | 0.997 |
BMS1 | RBM19 | ENSSSCP00000025609 | ENSSSCP00000010533 | BMS1 ribosome biogenesis factor. | RNA binding motif protein 19. | 0.993 |
BMS1 | SURF6 | ENSSSCP00000025609 | ENSSSCP00000050881 | BMS1 ribosome biogenesis factor. | Surfeit 6. | 0.625 |
BMS1 | WDR12 | ENSSSCP00000025609 | ENSSSCP00000017075 | BMS1 ribosome biogenesis factor. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.845 |
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