STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC8B1Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (604 aa)    
Predicted Functional Partners:
ATP13A4
Uncharacterized protein.
  
 
 0.794
TPCN1
Two pore calcium channel protein 1 isoform X1.
   
  
 0.705
TPCN2
Uncharacterized protein.
   
  
 0.670
SLC8A1
Solute carrier family 8 member A1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.640
RITA1
RBPJ interacting and tubulin associated 1.
      
 0.560
ATP13A5
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
  
 
 0.536
RC3H2
Ring finger and CCCH-type domains 2.
   
  
 0.522
CFAP73
Cilia and flagella associated protein 73.
   
  
 0.514
SLC18B1
Solute carrier family 18 member B1.
      
 0.514
CCDC34
Coiled-coil domain containing 34.
   
 
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.