Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCN2Transcobalamin-2 isoform 1. (429 aa)    
Predicted Functional Partners:
CD320
CD320 antigen isoform 1.
    
 0.993
B4GALT2
Beta-1,4-galactosyltransferase 2.
      
 0.734
EXOSC5
Exosome component 5.
      
 0.667
MPDU1
Mannose-P-dolichol utilization defect 1 protein isoform 1.
      
 0.640
SNX17
Sorting nexin 17.
    
 
 0.632
ZNF516
Zinc finger protein 516.
    
 
 0.623
TTC39B
Tetratricopeptide repeat domain 39B.
      
 0.599
PCGF5
Polycomb group RING finger protein 5 isoform X1.
    
 
 0.573
FKBP10
Peptidylprolyl isomerase.
      
 0.553
CYB561A3
Cytochrome b561 family member A3.
   
  
 0.550
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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