STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF70Zinc finger protein 70. (485 aa)    
Predicted Functional Partners:
RNF126
Ring finger protein 126.
    
 
 0.820
PGAM5
PGAM family member 5, mitochondrial serine/threonine protein phosphatase.
    
 
 0.700
ZNF140
Zinc finger protein 140.
  
 
 
0.595
RBM23
RNA binding motif protein 23.
    
 
 0.525
MRPL19
Mitochondrial ribosomal protein L19.
    
 
 0.520
TRIM28
Tripartite motif containing 28.
   
  0.517
ENGASE
Endo-beta-N-acetylglucosaminidase.
      
 0.506
MSH3
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
    
 
 0.481
PEX16
Peroxisomal membrane protein PEX16.
      
 0.469
EPHB2
EPH receptor B2.
    
 
 0.447
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.