STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1FProtein phosphatase, Mg2+/Mn2+ dependent 1F. (436 aa)    
Predicted Functional Partners:
CCDC92
Coiled-coil domain-containing protein 92 isoform X1.
      
 0.798
LPGAT1
Lysophosphatidylglycerol acyltransferase 1.
   
  
 0.722
CHMP6
Charged multivesicular body protein 6.
      
 0.669
FGD1
FYVE, RhoGEF and PH domain containing 1.
   
  
 0.653
ZFAND6
Zinc finger AN1-type containing 6.
      
 0.645
ANAPC7
Anaphase promoting complex subunit 7.
      
 0.626
WIPF1
WH2 domain-containing protein.
      
 0.624
ADARB2
Adenosine deaminase RNA specific B2 (inactive).
      
 0.624
BFSP2
Beaded filament structural protein 2; Belongs to the intermediate filament family.
    
 
 0.620
KCNH8
Potassium voltage-gated channel subfamily H member 8.
    
 
 0.616
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.