Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GSC2Goosecoid homeobox 2. (205 aa)    
Predicted Functional Partners:
WSCD2
WSC domain containing 2.
      
 0.838
ARRDC2
Arrestin domain containing 2.
      
 0.827
BABAM1
BRISC and BRCA1 A complex member 1.
      
 0.789
C12orf43
Chromosome 12 open reading frame 43.
      
 0.780
GALNT9
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.778
DGCR2
Uncharacterized protein.
      
 0.777
ZNF70
Zinc finger protein 70.
   
 0.775
ZNF596
Zinc finger protein 596.
   
 0.770
ESS2
Ess-2 splicing factor homolog.
    
 
 0.768
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
    
 
 0.743
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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