STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM67Tripartite motif containing 67. (784 aa)    
Predicted Functional Partners:
SNAP47
Synaptosome associated protein 47.
   
 
 0.680
FAM89A
Family with sequence similarity 89 member A.
      
 0.592
DMRTA2
Doublesex-and mab-3-related transcription factor A2.
   
  
 0.558
TGFBR3L
Transforming growth factor beta receptor 3 like.
      
 0.553
GPR88
Putative G-protein coupled receptor 88.
      
 0.552
UNCX
UNC homeobox.
   
  
 0.551
VASP
Vasodilator stimulated phosphoprotein.
    
 
 0.551
ZNF703
Zinc finger protein 703.
   
  
 0.550
SIPA1L1
Signal induced proliferation associated 1 like 1.
   
 
 0.550
CCDC177
Coiled-coil domain containing 177.
      
 0.548
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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