STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIT3Oncoprotein-induced transcript 3 protein. (546 aa)    
Predicted Functional Partners:
CLEC1B
C-type lectin domain family 1 member B.
   
 
 0.678
CLEC4F
C-type lectin domain family 4 member F.
   
 
 0.624
STAB2
Uncharacterized protein.
   
  
 0.589
LOC110259119
Uncharacterized protein.
   
  
 0.589
VWA1
Von Willebrand factor A domain containing 1.
    
 
 0.574
USHBP1
USH1 protein network component harmonin binding protein 1.
      
 0.571
TGFB1I1
Transforming growth factor beta-1-induced transcript 1 protein; Functions as a molecular adapter coordinating multiple protein-protein interactions at the focal adhesion complex and in the nucleus. Links various intracellular signaling modules to plasma membrane receptors and regulates the Wnt and TGFB signaling pathways.
    
 
 0.560
CD207
C-type lectin domain-containing protein.
   
 
 0.548
MRC1
Uncharacterized protein.
   
 
 0.543
SVEP1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
 
 0.538
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (18%) [HD]