STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM170BFamily with sequence similarity 170 member B. (286 aa)    
Predicted Functional Partners:
WIPF3
WAS/WASL interacting protein family member 3.
    
 
 0.694
LOC110259951
Tektin-4 isoform 1.
   
  
 0.592
F1SP87_PIG
Uncharacterized protein.
   
  
 0.589
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.589
HFM1
Helicase for meiosis 1.
    
 
 0.587
TNP1
Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction.
      
 0.571
CEP131
Centrosomal protein 131.
    
 
 0.547
TSSK4
Testis-specific serine/threonine-protein kinase 4 isoform 1.
    
 
 0.543
TEKT3
Tektin-3 isoform X1.
   
  
 0.534
TRIM36
Tripartite motif containing 36.
    
 
 0.527
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.