STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHATCholine O-acetyltransferase; Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses; Belongs to the carnitine/choline acetyltransferase family. (641 aa)    
Predicted Functional Partners:
SLC18A3
Solute carrier family 18 member A3.
 
 
  
 0.927
GPCPD1
Glycerophosphocholine phosphodiesterase GPCPD1.
   
 
 0.921
CHKA
Choline kinase alpha.
 
 
 
 0.903
A0A287AXH2_PIG
Uncharacterized protein.
     
 0.900
PHOSPHO1
Uncharacterized protein.
     
 0.900
HSD17B4
Peroxisomal multifunctional enzyme type 2 isoform 2.
   
 
 0.832
HTD2
MaoC-like domain-containing protein.
   
 
 0.706
SLC25A20
Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.696
SLC18A2
MFS domain-containing protein.
 
 
  
 0.663
SLC18A1
Solute carrier family 18 member A1.
 
 
  
 0.625
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.