STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD11Programmed cell death 11. (1875 aa)    
Predicted Functional Partners:
HEATR1
HEAT repeat containing 1.
   
 0.998
UTP4
U3 small nucleolar RNA-associated protein 4 homolog isoform 1.
   
 0.998
PWP2
Uncharacterized protein.
   
 0.998
BMS1
BMS1 ribosome biogenesis factor.
   
 
 0.997
NOP14
NOP14 nucleolar protein.
   
 0.996
NOL6
Nucleolar protein 6.
   
 0.996
NOP58
NOP58 ribonucleoprotein.
   
 0.996
WDR46
WD repeat-containing protein 46 isoform 1.
   
 0.996
UTP20
UTP20 small subunit processome component.
   
 0.995
WDR36
WD repeat domain 36.
   
 0.995
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.