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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC186Coiled-coil domain containing 186. (898 aa)    
Predicted Functional Partners:
CCDC138
Coiled-coil domain-containing protein 138 isoform 1.
      
 0.845
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.822
VPS54
Vacuolar protein sorting-associated protein 54 isoform 1.
      
 0.784
CPD
Carboxypeptidase D.
      
 0.739
RABL6
RAB, member RAS oncogene family like 6.
    
 
 0.709
VPS52
VPS52 subunit of GARP complex.
      
 0.679
CCDC22
Coiled-coil domain containing 22.
      
 0.652
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.645
CEP350
Uncharacterized protein.
   
    0.644
VPS33B
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.641
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.