Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCDC186Coiled-coil domain containing 186. (898 aa)    
Predicted Functional Partners:
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.787
CASC4
Cancer susceptibility 4.
      
 0.787
CCDC138
Coiled-coil domain-containing protein 138 isoform 1.
      
 0.757
TMEM87A
Transmembrane protein 87A.
   
  
 0.737
PRR36
DUF4596 domain-containing protein.
      
 0.722
VPS54
Vacuolar protein sorting-associated protein 54 isoform 1.
      
 0.720
ARFIP1
ADP ribosylation factor interacting protein 1.
      
 0.686
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.679
RAB30
RAB30, member RAS oncogene family.
    
 
 0.643
STX16-NPEPL1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
      
 0.622
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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