STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLIM1Actin binding LIM protein 1. (836 aa)    
Predicted Functional Partners:
ABLIM2
Actin binding LIM protein family member 2.
    
 0.941
CDC42
Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...]
     
 0.927
RAC3
Rac family small GTPase 3.
     
 0.926
RAC2
Rac family small GTPase 2.
     
 0.926
ABLIM3
Actin binding LIM protein family member 3.
     
  0.919
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
    
   0.750
SYNGAP1
Synaptic Ras GTPase activating protein 1.
    
   0.665
ANLN
Anillin actin binding protein.
    
   0.617
DLG2
Discs large MAGUK scaffold protein 2.
    
 
 0.611
STK24
Serine/threonine kinase 24.
      
 0.610
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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