STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM160B1Family with sequence similarity 160 member B1. (765 aa)    
Predicted Functional Partners:
FAM167B
Family with sequence similarity 167 member B.
      
 0.870
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.846
AKTIP
AKT-interacting protein isoform 1.
    
 
 0.648
TEX35
Testis expressed 35.
      
 0.626
FOCAD
Focadhesin.
      
 0.611
VWA2
Von Willebrand factor A domain containing 2.
      
 0.598
TRUB1
TruB pseudouridine synthase family member 1.
      
 0.559
LETMD1
LETM1 domain-containing protein 1 isoform a.
      
 0.554
HOOK2
Hook microtubule tethering protein 2.
    
 
 0.552
DHX32
DEAH-box helicase 32 (putative).
      
 0.546
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.